Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HCN1O60741 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HCN1O60741 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
HCN1O60741 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HCN1O60741 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 AC112693.3-201ENST00000624819 1983 ntBASIC14.4□□□□□ -0.1
HCN1O60741 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN1O60741 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 COX5BP8-201ENST00000416911 349 ntBASIC14.4□□□□□ -0.1
HCN1O60741 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 MEIS3P1-201ENST00000495167 958 ntBASIC14.4□□□□□ -0.1
HCN1O60741 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN1O60741 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.4□□□□□ -0.1
HCN1O60741 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN1O60741 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN1O60741 AL450472.2-201ENST00000603663 1156 ntBASIC14.4□□□□□ -0.1
HCN1O60741 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.4□□□□□ -0.1
HCN1O60741 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN1O60741 C18orf15-201ENST00000623680 2534 ntBASIC14.4□□□□□ -0.1
HCN1O60741 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN1O60741 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN1O60741 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
HCN1O60741 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
HCN1O60741 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.4□□□□□ -0.11
HCN1O60741 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HCN1O60741 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 AC127383.1-201ENST00000444697 1800 ntBASIC14.39□□□□□ -0.11
HCN1O60741 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HCN1O60741 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.39□□□□□ -0.11
HCN1O60741 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN1O60741 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.39□□□□□ -0.11
HCN1O60741 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.39□□□□□ -0.11
HCN1O60741 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
HCN1O60741 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN1O60741 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN1O60741 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms