Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA2E9PIF3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA2E9PIF3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC093525.8-201ENST00000624099 1342 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC012441.1-201ENST00000446669 685 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC092658.1-201ENST00000505836 891 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC026410.3-201ENST00000514280 936 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC093813.1-201ENST00000605066 256 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC107373.2-201ENST00000607735 490 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AC090616.6-203ENST00000579186 1945 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 REXO1L6P-201ENST00000603433 1515 ntBASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA2E9PIF3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 OR2I1P-210ENST00000642037 4691 ntBASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 FTH1P14-201ENST00000482930 551 ntBASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPA2E9PIF3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms