Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC00473A8K010 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00473A8K010 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00473A8K010 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 KRT18P13-201ENST00000400056 1290 ntBASIC12.49□□□□□ -0.41
LINC00473A8K010 AC107890.1-201ENST00000422478 521 ntBASIC12.49□□□□□ -0.41
LINC00473A8K010 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00473A8K010 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
LINC00473A8K010 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 AC015911.4-201ENST00000588022 1070 ntBASIC12.49□□□□□ -0.41
LINC00473A8K010 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00473A8K010 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00473A8K010 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00473A8K010 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00473A8K010 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00473A8K010 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 AC097493.3-201ENST00000509725 367 ntBASIC12.48□□□□□ -0.41
LINC00473A8K010 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 ZNF890P-202ENST00000530367 1156 ntBASIC12.48□□□□□ -0.41
LINC00473A8K010 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 SAMD11P1-201ENST00000571429 661 ntBASIC12.48□□□□□ -0.41
LINC00473A8K010 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 AC004461.2-201ENST00000629517 803 ntBASIC12.48□□□□□ -0.41
LINC00473A8K010 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LINC00473A8K010 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
LINC00473A8K010 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00473A8K010 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00473A8K010 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00473A8K010 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00473A8K010 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms