Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB4Q9UN71 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 AC026202.3-201ENST00000600805 1127 ntBASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGB4Q9UN71 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB4Q9UN71 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGB4Q9UN71 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB4Q9UN71 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB4Q9UN71 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB4Q9UN71 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB4Q9UN71 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGB4Q9UN71 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 AC141586.4-201ENST00000624558 1573 ntBASIC22.21■■□□□ 1.15
PCDHGB4Q9UN71 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 MIR6089-201ENST00000616698 64 ntBASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDHGB4Q9UN71 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGB4Q9UN71 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB4Q9UN71 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGB4Q9UN71 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGB4Q9UN71 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 AC133552.2-201ENST00000619106 1032 ntBASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHGB4Q9UN71 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 FOXO3B-201ENST00000395675 1928 ntBASIC22.16■■□□□ 1.14
PCDHGB4Q9UN71 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 RNF126P1-201ENST00000567452 1320 ntBASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGB4Q9UN71 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms