Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCNL1Q9UK58 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 AL138724.1-201ENST00000606771 1088 ntBASIC29.86■■■□□ 2.37
CCNL1Q9UK58 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CCNL1Q9UK58 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCNL1Q9UK58 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.85■■■□□ 2.37
CCNL1Q9UK58 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.85■■■□□ 2.37
CCNL1Q9UK58 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCNL1Q9UK58 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCNL1Q9UK58 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.84■■■□□ 2.37
CCNL1Q9UK58 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.84■■■□□ 2.37
CCNL1Q9UK58 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCNL1Q9UK58 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCNL1Q9UK58 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCNL1Q9UK58 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
CCNL1Q9UK58 AC097639.1-201ENST00000565519 1891 ntBASIC29.82■■■□□ 2.37
CCNL1Q9UK58 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.82■■■□□ 2.36
CCNL1Q9UK58 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 IKBKGP1-201ENST00000612193 1073 ntBASIC29.81■■■□□ 2.36
CCNL1Q9UK58 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.81■■■□□ 2.36
CCNL1Q9UK58 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCNL1Q9UK58 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CCNL1Q9UK58 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.8■■■□□ 2.36
CCNL1Q9UK58 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CCNL1Q9UK58 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCNL1Q9UK58 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 AC096887.2-201ENST00000623443 1957 ntBASIC29.78■■■□□ 2.36
CCNL1Q9UK58 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
CCNL1Q9UK58 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.77■■■□□ 2.36
CCNL1Q9UK58 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.77■■■□□ 2.36
CCNL1Q9UK58 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.77■■■□□ 2.36
CCNL1Q9UK58 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.77■■■□□ 2.36
CCNL1Q9UK58 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCNL1Q9UK58 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCNL1Q9UK58 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CCNL1Q9UK58 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CCNL1Q9UK58 AC022517.1-201ENST00000592429 346 ntBASIC29.76■■■□□ 2.35
CCNL1Q9UK58 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CCNL1Q9UK58 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.75■■■□□ 2.35
CCNL1Q9UK58 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCNL1Q9UK58 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.75■■■□□ 2.35
CCNL1Q9UK58 AC136469.2-201ENST00000623944 1028 ntBASIC29.75■■■□□ 2.35
CCNL1Q9UK58 AC009102.2-201ENST00000606772 1639 ntBASIC29.74■■■□□ 2.35
CCNL1Q9UK58 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 AC034268.1-201ENST00000441047 882 ntBASIC29.74■■■□□ 2.35
CCNL1Q9UK58 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.74■■■□□ 2.35
CCNL1Q9UK58 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.73■■■□□ 2.35
CCNL1Q9UK58 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.73■■■□□ 2.35
CCNL1Q9UK58 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCNL1Q9UK58 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCNL1Q9UK58 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CCNL1Q9UK58 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.72■■■□□ 2.35
CCNL1Q9UK58 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCNL1Q9UK58 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 AC233992.3-201ENST00000607491 485 ntBASIC29.71■■■□□ 2.35
CCNL1Q9UK58 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CCNL1Q9UK58 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CCNL1Q9UK58 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
CCNL1Q9UK58 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CCNL1Q9UK58 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CCNL1Q9UK58 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms