Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 AC131274.2-201ENST00000580697 1507 ntBASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 AL162430.1-201ENST00000480705 870 ntBASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 CA15P2-201ENST00000611168 834 ntBASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PHRF1Q9P1Y6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.44■■■□□ 2.62
PHRF1Q9P1Y6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.44■■■□□ 2.62
PHRF1Q9P1Y6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHRF1Q9P1Y6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHRF1Q9P1Y6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 SERBP1P1-201ENST00000396021 1160 ntBASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
PHRF1Q9P1Y6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 AC005703.6-201ENST00000623265 1329 ntBASIC31.42■■■□□ 2.62
PHRF1Q9P1Y6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHRF1Q9P1Y6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHRF1Q9P1Y6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PHRF1Q9P1Y6 AC011298.3-201ENST00000615796 283 ntBASIC31.41■■■□□ 2.62
PHRF1Q9P1Y6 RASA4CP-201ENST00000424092 1398 ntBASIC31.4■■■□□ 2.62
PHRF1Q9P1Y6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHRF1Q9P1Y6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHRF1Q9P1Y6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
PHRF1Q9P1Y6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.39■■■□□ 2.62
PHRF1Q9P1Y6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
PHRF1Q9P1Y6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.38■■■□□ 2.61
PHRF1Q9P1Y6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PHRF1Q9P1Y6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHRF1Q9P1Y6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
PHRF1Q9P1Y6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.37■■■□□ 2.61
PHRF1Q9P1Y6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
PHRF1Q9P1Y6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.36■■■□□ 2.61
PHRF1Q9P1Y6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHRF1Q9P1Y6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
PHRF1Q9P1Y6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
PHRF1Q9P1Y6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 SYT6-210ENST00000641643 1587 ntBASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.35■■■□□ 2.61
PHRF1Q9P1Y6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHRF1Q9P1Y6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PHRF1Q9P1Y6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
PHRF1Q9P1Y6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PHRF1Q9P1Y6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PHRF1Q9P1Y6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.33■■■□□ 2.61
PHRF1Q9P1Y6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
PHRF1Q9P1Y6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHRF1Q9P1Y6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 AC099791.1-201ENST00000416440 715 ntBASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.31■■■□□ 2.6
PHRF1Q9P1Y6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PHRF1Q9P1Y6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PHRF1Q9P1Y6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PHRF1Q9P1Y6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.3■■■□□ 2.6
PHRF1Q9P1Y6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHRF1Q9P1Y6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.28■■■□□ 2.6
PHRF1Q9P1Y6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.28■■■□□ 2.6
PHRF1Q9P1Y6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PHRF1Q9P1Y6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.28■■■□□ 2.6
PHRF1Q9P1Y6 AC099791.2-201ENST00000605725 427 ntBASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 C17orf82-201ENST00000623772 1530 ntBASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms