Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLN6Q9NWW5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLN6Q9NWW5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLN6Q9NWW5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21■□□□□ 0.95
CLN6Q9NWW5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21■□□□□ 0.95
CLN6Q9NWW5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21■□□□□ 0.95
CLN6Q9NWW5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLN6Q9NWW5 ABHD17AP4-201ENST00000411545 909 ntBASIC21■□□□□ 0.95
CLN6Q9NWW5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21■□□□□ 0.95
CLN6Q9NWW5 AL157400.5-201ENST00000507624 621 ntBASIC21■□□□□ 0.95
CLN6Q9NWW5 AC025884.2-201ENST00000553429 711 ntBASIC21■□□□□ 0.95
CLN6Q9NWW5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLN6Q9NWW5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLN6Q9NWW5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21■□□□□ 0.95
CLN6Q9NWW5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLN6Q9NWW5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
CLN6Q9NWW5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLN6Q9NWW5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 AC016575.1-201ENST00000607026 382 ntBASIC20.98■□□□□ 0.95
CLN6Q9NWW5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 PKD1P6-201ENST00000343738 4769 ntBASIC20.98■□□□□ 0.95
CLN6Q9NWW5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLN6Q9NWW5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLN6Q9NWW5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN6Q9NWW5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN6Q9NWW5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 AC233723.2-201ENST00000623798 2106 ntBASIC20.94■□□□□ 0.94
CLN6Q9NWW5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN6Q9NWW5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN6Q9NWW5 AC060814.1-201ENST00000554326 538 ntBASIC20.93■□□□□ 0.94
CLN6Q9NWW5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.93■□□□□ 0.94
CLN6Q9NWW5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN6Q9NWW5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLN6Q9NWW5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLN6Q9NWW5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 SMPD5-203ENST00000639008 1464 ntBASIC20.92■□□□□ 0.94
CLN6Q9NWW5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CLN6Q9NWW5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms