Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CUEDC1Q9NWM3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 AL356441.2-201ENST00000443009 864 ntBASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CUEDC1Q9NWM3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CUEDC1Q9NWM3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 AC137630.3-201ENST00000607245 391 ntBASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.29■■□□□ 1.16
CUEDC1Q9NWM3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CUEDC1Q9NWM3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CUEDC1Q9NWM3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
CUEDC1Q9NWM3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CUEDC1Q9NWM3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 BX664725.1-201ENST00000438252 379 ntBASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CUEDC1Q9NWM3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 AC131274.2-201ENST00000580697 1507 ntBASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 LINC00543-201ENST00000567234 1845 ntBASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CUEDC1Q9NWM3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CUEDC1Q9NWM3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.22■■□□□ 1.15
CUEDC1Q9NWM3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms