Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS11Q9H270 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS11Q9H270 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS11Q9H270 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS11Q9H270 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS11Q9H270 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
VPS11Q9H270 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS11Q9H270 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS11Q9H270 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS11Q9H270 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS11Q9H270 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS11Q9H270 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS11Q9H270 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS11Q9H270 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS11Q9H270 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS11Q9H270 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
VPS11Q9H270 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS11Q9H270 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS11Q9H270 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS11Q9H270 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS11Q9H270 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
VPS11Q9H270 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.13■■□□□ 1.29
VPS11Q9H270 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS11Q9H270 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS11Q9H270 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS11Q9H270 MIR4449-201ENST00000578365 66 ntBASIC23.12■■□□□ 1.29
VPS11Q9H270 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS11Q9H270 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS11Q9H270 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS11Q9H270 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS11Q9H270 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
VPS11Q9H270 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.11■■□□□ 1.29
VPS11Q9H270 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
VPS11Q9H270 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS11Q9H270 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.11■■□□□ 1.29
VPS11Q9H270 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS11Q9H270 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.1■■□□□ 1.29
VPS11Q9H270 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
VPS11Q9H270 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
VPS11Q9H270 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
VPS11Q9H270 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS11Q9H270 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
VPS11Q9H270 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.1■■□□□ 1.29
VPS11Q9H270 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
VPS11Q9H270 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.09■■□□□ 1.29
VPS11Q9H270 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
VPS11Q9H270 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
VPS11Q9H270 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS11Q9H270 AC009831.1-201ENST00000580420 1582 ntBASIC23.09■■□□□ 1.29
VPS11Q9H270 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS11Q9H270 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS11Q9H270 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS11Q9H270 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
VPS11Q9H270 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.08■■□□□ 1.29
VPS11Q9H270 AC133552.2-201ENST00000619106 1032 ntBASIC23.08■■□□□ 1.29
VPS11Q9H270 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.08■■□□□ 1.29
VPS11Q9H270 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.08■■□□□ 1.29
VPS11Q9H270 AL117328.2-201ENST00000624617 1940 ntBASIC23.08■■□□□ 1.28
VPS11Q9H270 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.08■■□□□ 1.28
VPS11Q9H270 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VPS11Q9H270 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
VPS11Q9H270 CLDN5-201ENST00000403084 2357 ntBASIC23.07■■□□□ 1.28
VPS11Q9H270 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
VPS11Q9H270 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS11Q9H270 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
VPS11Q9H270 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS11Q9H270 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS11Q9H270 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS11Q9H270 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS11Q9H270 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS11Q9H270 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
VPS11Q9H270 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.06■■□□□ 1.28
VPS11Q9H270 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VPS11Q9H270 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms