Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.31■□□□□ 0.84
COMMD4Q9H0A8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COMMD4Q9H0A8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COMMD4Q9H0A8 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.29■□□□□ 0.84
COMMD4Q9H0A8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COMMD4Q9H0A8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.29■□□□□ 0.84
COMMD4Q9H0A8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD4Q9H0A8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD4Q9H0A8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD4Q9H0A8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD4Q9H0A8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 RAP2CP1-202ENST00000605179 643 ntBASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 PKD1P6-201ENST00000343738 4769 ntBASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COMMD4Q9H0A8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD4Q9H0A8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD4Q9H0A8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD4Q9H0A8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 MIR4449-201ENST00000578365 66 ntBASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD4Q9H0A8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 AC026202.3-201ENST00000600805 1127 ntBASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD4Q9H0A8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 AC079834.2-201ENST00000609776 1949 ntBASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD4Q9H0A8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD4Q9H0A8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms