Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 RAP2CP1-202ENST00000605179 643 ntBASIC19.75■□□□□ 0.75
NICN1Q9BSH3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NICN1Q9BSH3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
NICN1Q9BSH3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NICN1Q9BSH3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NICN1Q9BSH3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NICN1Q9BSH3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NICN1Q9BSH3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 AC026202.3-201ENST00000600805 1127 ntBASIC19.71■□□□□ 0.75
NICN1Q9BSH3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NICN1Q9BSH3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
NICN1Q9BSH3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.69■□□□□ 0.74
NICN1Q9BSH3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NICN1Q9BSH3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 KRT18P10-201ENST00000388836 1287 ntBASIC19.67■□□□□ 0.74
NICN1Q9BSH3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.67■□□□□ 0.74
NICN1Q9BSH3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms