Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEM54Q969K7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM54Q969K7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM54Q969K7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 AC004812.2-201ENST00000611079 2094 ntBASIC20.42■□□□□ 0.86
TMEM54Q969K7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM54Q969K7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM54Q969K7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM54Q969K7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM54Q969K7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TMEM54Q969K7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM54Q969K7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM54Q969K7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM54Q969K7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM54Q969K7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
TMEM54Q969K7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM54Q969K7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM54Q969K7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEM54Q969K7 AL022069.1-201ENST00000568025 1636 ntBASIC20.4■□□□□ 0.86
TMEM54Q969K7 AC131274.2-201ENST00000580697 1507 ntBASIC20.4■□□□□ 0.86
TMEM54Q969K7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM54Q969K7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM54Q969K7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
TMEM54Q969K7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TMEM54Q969K7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.39■□□□□ 0.85
TMEM54Q969K7 RARRES2P1-201ENST00000474487 481 ntBASIC20.39■□□□□ 0.85
TMEM54Q969K7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM54Q969K7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM54Q969K7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM54Q969K7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM54Q969K7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM54Q969K7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM54Q969K7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM54Q969K7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
TMEM54Q969K7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TMEM54Q969K7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM54Q969K7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TMEM54Q969K7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM54Q969K7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM54Q969K7 AC137630.3-201ENST00000607245 391 ntBASIC20.37■□□□□ 0.85
TMEM54Q969K7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TMEM54Q969K7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM54Q969K7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM54Q969K7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM54Q969K7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM54Q969K7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM54Q969K7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.35■□□□□ 0.85
TMEM54Q969K7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM54Q969K7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM54Q969K7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM54Q969K7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM54Q969K7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM54Q969K7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM54Q969K7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM54Q969K7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM54Q969K7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM54Q969K7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM54Q969K7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.34■□□□□ 0.85
TMEM54Q969K7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM54Q969K7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM54Q969K7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.33■□□□□ 0.85
TMEM54Q969K7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TMEM54Q969K7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TMEM54Q969K7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM54Q969K7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM54Q969K7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.84
TMEM54Q969K7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TMEM54Q969K7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM54Q969K7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM54Q969K7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM54Q969K7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM54Q969K7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms