Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A1Q93096 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PTP4A1Q93096 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.72■□□□□ 0.91
PTP4A1Q93096 ABHD17AP5-201ENST00000580133 923 ntBASIC20.72■□□□□ 0.91
PTP4A1Q93096 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PTP4A1Q93096 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A1Q93096 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTP4A1Q93096 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTP4A1Q93096 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTP4A1Q93096 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A1Q93096 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A1Q93096 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A1Q93096 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PTP4A1Q93096 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A1Q93096 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTP4A1Q93096 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
PTP4A1Q93096 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PTP4A1Q93096 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
PTP4A1Q93096 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
PTP4A1Q93096 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.69■□□□□ 0.9
PTP4A1Q93096 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.69■□□□□ 0.9
PTP4A1Q93096 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.69■□□□□ 0.9
PTP4A1Q93096 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTP4A1Q93096 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 U85056.1-201ENST00000616429 682 ntBASIC20.68■□□□□ 0.9
PTP4A1Q93096 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.68■□□□□ 0.9
PTP4A1Q93096 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTP4A1Q93096 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
PTP4A1Q93096 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 AL592293.1-201ENST00000502889 1188 ntBASIC20.67■□□□□ 0.9
PTP4A1Q93096 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 CLDN5-201ENST00000403084 2357 ntBASIC20.67■□□□□ 0.9
PTP4A1Q93096 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTP4A1Q93096 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTP4A1Q93096 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTP4A1Q93096 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PTP4A1Q93096 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.66■□□□□ 0.9
PTP4A1Q93096 RPS2P7-201ENST00000447334 885 ntBASIC20.66■□□□□ 0.9
PTP4A1Q93096 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PTP4A1Q93096 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.66■□□□□ 0.9
PTP4A1Q93096 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTP4A1Q93096 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.65■□□□□ 0.9
PTP4A1Q93096 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.65■□□□□ 0.9
PTP4A1Q93096 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTP4A1Q93096 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.65■□□□□ 0.9
PTP4A1Q93096 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTP4A1Q93096 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms