Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
NPIPB3Q92617 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB3Q92617 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB3Q92617 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB3Q92617 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
NPIPB3Q92617 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB3Q92617 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB3Q92617 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB3Q92617 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPB3Q92617 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPB3Q92617 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NPIPB3Q92617 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB3Q92617 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB3Q92617 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB3Q92617 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB3Q92617 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPB3Q92617 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NPIPB3Q92617 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NPIPB3Q92617 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB3Q92617 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NPIPB3Q92617 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NPIPB3Q92617 AC018755.3-202ENST00000596210 929 ntBASIC18.12■□□□□ 0.49
NPIPB3Q92617 RNF126P1-201ENST00000567452 1320 ntBASIC18.12■□□□□ 0.49
NPIPB3Q92617 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB3Q92617 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPB3Q92617 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPB3Q92617 RPS2P7-201ENST00000447334 885 ntBASIC18.11■□□□□ 0.49
NPIPB3Q92617 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NPIPB3Q92617 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPB3Q92617 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NPIPB3Q92617 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
NPIPB3Q92617 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPB3Q92617 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB3Q92617 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB3Q92617 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.1■□□□□ 0.49
NPIPB3Q92617 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB3Q92617 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB3Q92617 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPB3Q92617 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPB3Q92617 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPB3Q92617 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPB3Q92617 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.08■□□□□ 0.49
NPIPB3Q92617 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.08■□□□□ 0.49
NPIPB3Q92617 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPB3Q92617 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.08■□□□□ 0.48
NPIPB3Q92617 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPB3Q92617 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.08■□□□□ 0.48
NPIPB3Q92617 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPB3Q92617 AC090877.2-201ENST00000558441 1738 ntBASIC18.08■□□□□ 0.48
NPIPB3Q92617 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPB3Q92617 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms