Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT9Q92600 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT9Q92600 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT9Q92600 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
CNOT9Q92600 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT9Q92600 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT9Q92600 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT9Q92600 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT9Q92600 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT9Q92600 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.25■□□□□ 0.99
CNOT9Q92600 AC022616.5-201ENST00000518796 181 ntBASIC21.25■□□□□ 0.99
CNOT9Q92600 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT9Q92600 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.25■□□□□ 0.99
CNOT9Q92600 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT9Q92600 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT9Q92600 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT9Q92600 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT9Q92600 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT9Q92600 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT9Q92600 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.24■□□□□ 0.99
CNOT9Q92600 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT9Q92600 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT9Q92600 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT9Q92600 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT9Q92600 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT9Q92600 ABCB10P4-201ENST00000566803 2184 ntBASIC21.24■□□□□ 0.99
CNOT9Q92600 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.24■□□□□ 0.99
CNOT9Q92600 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CNOT9Q92600 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.23■□□□□ 0.99
CNOT9Q92600 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CNOT9Q92600 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT9Q92600 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.23■□□□□ 0.99
CNOT9Q92600 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
CNOT9Q92600 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CNOT9Q92600 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 AC011551.1-201ENST00000614101 683 ntBASIC21.22■□□□□ 0.99
CNOT9Q92600 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CNOT9Q92600 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT9Q92600 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT9Q92600 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT9Q92600 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT9Q92600 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT9Q92600 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT9Q92600 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT9Q92600 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT9Q92600 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT9Q92600 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CNOT9Q92600 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT9Q92600 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT9Q92600 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT9Q92600 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT9Q92600 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
CNOT9Q92600 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT9Q92600 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNOT9Q92600 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT9Q92600 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CNOT9Q92600 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
CNOT9Q92600 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT9Q92600 AC120024.1-201ENST00000562672 995 ntBASIC21.19■□□□□ 0.98
CNOT9Q92600 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CNOT9Q92600 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNOT9Q92600 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT9Q92600 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
CNOT9Q92600 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT9Q92600 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT9Q92600 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT9Q92600 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT9Q92600 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNOT9Q92600 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT9Q92600 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT9Q92600 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT9Q92600 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT9Q92600 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
CNOT9Q92600 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT9Q92600 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT9Q92600 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT9Q92600 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT9Q92600 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
CNOT9Q92600 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNOT9Q92600 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNOT9Q92600 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CNOT9Q92600 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT9Q92600 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT9Q92600 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT9Q92600 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT9Q92600 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT9Q92600 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT9Q92600 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT9Q92600 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms