Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM4Q8WVI0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM4Q8WVI0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 DUX4L29-201ENST00000425409 679 ntBASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 AC092068.2-201ENST00000590491 1708 ntBASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM4Q8WVI0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM4Q8WVI0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM4Q8WVI0 AL024507.2-201ENST00000606070 2574 ntBASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM4Q8WVI0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM4Q8WVI0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMIM4Q8WVI0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L13-201ENST00000554103 1267 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L15-201ENST00000611059 1267 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L23-201ENST00000615195 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L24-201ENST00000617576 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L22-201ENST00000618238 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L20-201ENST00000619712 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L21-201ENST00000622058 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L10-201ENST00000622460 1267 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 DUX4L25-201ENST00000624915 1269 ntBASIC19.69■□□□□ 0.74
SMIM4Q8WVI0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms