Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
BEST4Q8NFU0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST4Q8NFU0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST4Q8NFU0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST4Q8NFU0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.79■□□□□ 0.76
BEST4Q8NFU0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
BEST4Q8NFU0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BEST4Q8NFU0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.77■□□□□ 0.75
BEST4Q8NFU0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BEST4Q8NFU0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 RPS2P35-201ENST00000443417 897 ntBASIC19.76■□□□□ 0.75
BEST4Q8NFU0 MIR6089-201ENST00000616698 64 ntBASIC19.76■□□□□ 0.75
BEST4Q8NFU0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 PKD1P6-201ENST00000343738 4769 ntBASIC19.76■□□□□ 0.75
BEST4Q8NFU0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BEST4Q8NFU0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BEST4Q8NFU0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 ZNRF2P2-203ENST00000454624 420 ntBASIC19.74■□□□□ 0.75
BEST4Q8NFU0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 AC007375.3-201ENST00000600936 2314 ntBASIC19.74■□□□□ 0.75
BEST4Q8NFU0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms