Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM2Q8NEG5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 AC239859.2-201ENST00000444165 318 ntBASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZSWIM2Q8NEG5 AC131274.2-201ENST00000580697 1507 ntBASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ZSWIM2Q8NEG5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM2Q8NEG5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM2Q8NEG5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.22■■□□□ 1.63
ZSWIM2Q8NEG5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM2Q8NEG5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ZSWIM2Q8NEG5 AC021242.3-201ENST00000607598 1377 ntBASIC25.2■■□□□ 1.63
ZSWIM2Q8NEG5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM2Q8NEG5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.19■■□□□ 1.62
ZSWIM2Q8NEG5 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.19■■□□□ 1.62
ZSWIM2Q8NEG5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
ZSWIM2Q8NEG5 AC004812.2-201ENST00000611079 2094 ntBASIC25.19■■□□□ 1.62
ZSWIM2Q8NEG5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 AC093323.1-202ENST00000635031 2045 ntBASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZSWIM2Q8NEG5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 LINC00543-201ENST00000567234 1845 ntBASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 BX664725.1-201ENST00000438252 379 ntBASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZSWIM2Q8NEG5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZSWIM2Q8NEG5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ZSWIM2Q8NEG5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.16■■□□□ 1.62
ZSWIM2Q8NEG5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.16■■□□□ 1.62
ZSWIM2Q8NEG5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 Z92544.1-202ENST00000571933 1220 ntBASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 MIR4787-201ENST00000607364 84 ntBASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZSWIM2Q8NEG5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ZSWIM2Q8NEG5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.14■■□□□ 1.62
ZSWIM2Q8NEG5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZSWIM2Q8NEG5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.14■■□□□ 1.62
ZSWIM2Q8NEG5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.14■■□□□ 1.62
ZSWIM2Q8NEG5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
ZSWIM2Q8NEG5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZSWIM2Q8NEG5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZSWIM2Q8NEG5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.13■■□□□ 1.61
ZSWIM2Q8NEG5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZSWIM2Q8NEG5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZSWIM2Q8NEG5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms