Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN22Q8N7P3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21■□□□□ 0.95
CLDN22Q8N7P3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21■□□□□ 0.95
CLDN22Q8N7P3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN22Q8N7P3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN22Q8N7P3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 U85056.1-201ENST00000616429 682 ntBASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN22Q8N7P3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN22Q8N7P3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN22Q8N7P3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN22Q8N7P3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.94■□□□□ 0.94
CLDN22Q8N7P3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 DUX4L9-201ENST00000449051 1259 ntBASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN22Q8N7P3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN22Q8N7P3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN22Q8N7P3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN22Q8N7P3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CLDN22Q8N7P3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN22Q8N7P3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 AC018755.3-202ENST00000596210 929 ntBASIC20.91■□□□□ 0.94
CLDN22Q8N7P3 AL161729.1-201ENST00000604104 1402 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms