Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PHTF2Q8N3S3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.93■■□□□ 1.42
PHTF2Q8N3S3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PHTF2Q8N3S3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.92■■□□□ 1.42
PHTF2Q8N3S3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PHTF2Q8N3S3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 SNX5-217ENST00000606557 1087 ntBASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PHTF2Q8N3S3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 AL136116.3-201ENST00000402907 1138 ntBASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 AL512631.2-201ENST00000604634 923 ntBASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 MIR4466-201ENST00000606121 54 ntBASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHTF2Q8N3S3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PHTF2Q8N3S3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
PHTF2Q8N3S3 MIR638-201ENST00000385237 100 ntBASIC23.89■■□□□ 1.41
PHTF2Q8N3S3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.89■■□□□ 1.41
PHTF2Q8N3S3 AL356740.2-201ENST00000601559 647 ntBASIC23.89■■□□□ 1.41
PHTF2Q8N3S3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
PHTF2Q8N3S3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.88■■□□□ 1.41
PHTF2Q8N3S3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.88■■□□□ 1.41
PHTF2Q8N3S3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PHTF2Q8N3S3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PHTF2Q8N3S3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 AL139246.5-201ENST00000606645 996 ntBASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PHTF2Q8N3S3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 MIR6722-201ENST00000617286 78 ntBASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PHTF2Q8N3S3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.83■■□□□ 1.41
PHTF2Q8N3S3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
PHTF2Q8N3S3 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.82■■□□□ 1.4
PHTF2Q8N3S3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.82■■□□□ 1.4
PHTF2Q8N3S3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
PHTF2Q8N3S3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHTF2Q8N3S3 AC110285.6-201ENST00000617652 491 ntBASIC23.81■■□□□ 1.4
PHTF2Q8N3S3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHTF2Q8N3S3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHTF2Q8N3S3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHTF2Q8N3S3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHTF2Q8N3S3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHTF2Q8N3S3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.8■■□□□ 1.4
PHTF2Q8N3S3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PHTF2Q8N3S3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHTF2Q8N3S3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHTF2Q8N3S3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.78■■□□□ 1.4
PHTF2Q8N3S3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHTF2Q8N3S3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms