Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC142381.2-201ENST00000566120 298 ntBASIC23.45■■□□□ 1.34
PGBD3Q8N328 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PGBD3Q8N328 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
PGBD3Q8N328 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.44■■□□□ 1.34
PGBD3Q8N328 AC145676.1-201ENST00000514988 2004 ntBASIC23.44■■□□□ 1.34
PGBD3Q8N328 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 SRD5A1P1-201ENST00000442297 786 ntBASIC23.44■■□□□ 1.34
PGBD3Q8N328 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.44■■□□□ 1.34
PGBD3Q8N328 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PGBD3Q8N328 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PGBD3Q8N328 AC135731.1-201ENST00000569415 2548 ntBASIC23.43■■□□□ 1.34
PGBD3Q8N328 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.43■■□□□ 1.34
PGBD3Q8N328 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.43■■□□□ 1.34
PGBD3Q8N328 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.42■■□□□ 1.34
PGBD3Q8N328 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.42■■□□□ 1.34
PGBD3Q8N328 AL136162.1-201ENST00000607711 1078 ntBASIC23.42■■□□□ 1.34
PGBD3Q8N328 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PGBD3Q8N328 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.42■■□□□ 1.34
PGBD3Q8N328 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.41■■□□□ 1.34
PGBD3Q8N328 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.41■■□□□ 1.34
PGBD3Q8N328 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.41■■□□□ 1.34
PGBD3Q8N328 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.41■■□□□ 1.34
PGBD3Q8N328 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PGBD3Q8N328 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PGBD3Q8N328 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PGBD3Q8N328 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PGBD3Q8N328 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PGBD3Q8N328 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
PGBD3Q8N328 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PGBD3Q8N328 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PGBD3Q8N328 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
PGBD3Q8N328 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
PGBD3Q8N328 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PGBD3Q8N328 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PGBD3Q8N328 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGBD3Q8N328 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PGBD3Q8N328 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.38■■□□□ 1.33
PGBD3Q8N328 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.38■■□□□ 1.33
PGBD3Q8N328 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGBD3Q8N328 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGBD3Q8N328 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 AC135279.3-201ENST00000610945 1311 ntBASIC23.37■■□□□ 1.33
PGBD3Q8N328 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGBD3Q8N328 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PGBD3Q8N328 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGBD3Q8N328 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 AC010501.1-201ENST00000606270 1962 ntBASIC23.36■■□□□ 1.33
PGBD3Q8N328 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGBD3Q8N328 ZNRF2P3-201ENST00000424200 374 ntBASIC23.36■■□□□ 1.33
PGBD3Q8N328 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.36■■□□□ 1.33
PGBD3Q8N328 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PGBD3Q8N328 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.35■■□□□ 1.33
PGBD3Q8N328 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PGBD3Q8N328 AC004448.1-201ENST00000458332 883 ntBASIC23.35■■□□□ 1.33
PGBD3Q8N328 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PGBD3Q8N328 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PGBD3Q8N328 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PGBD3Q8N328 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PGBD3Q8N328 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PGBD3Q8N328 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PGBD3Q8N328 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PGBD3Q8N328 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.34■■□□□ 1.33
PGBD3Q8N328 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.34■■□□□ 1.33
PGBD3Q8N328 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PGBD3Q8N328 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PGBD3Q8N328 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PGBD3Q8N328 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.33■■□□□ 1.33
PGBD3Q8N328 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PGBD3Q8N328 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms