Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01561Q8N1V8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01561Q8N1V8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LINC01561Q8N1V8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.46■□□□□ 0.06
LINC01561Q8N1V8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01561Q8N1V8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
LINC01561Q8N1V8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LINC01561Q8N1V8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 AC090877.2-201ENST00000558441 1738 ntBASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 AC092068.2-201ENST00000590491 1708 ntBASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01561Q8N1V8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01561Q8N1V8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 AL592295.1-201ENST00000400984 884 ntBASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01561Q8N1V8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms