Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CPNE9Q8IYJ1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 AC022616.5-201ENST00000518796 181 ntBASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CPNE9Q8IYJ1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CPNE9Q8IYJ1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.82■■□□□ 1.24
CPNE9Q8IYJ1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 AC011551.1-201ENST00000614101 683 ntBASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPNE9Q8IYJ1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CPNE9Q8IYJ1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 AC133561.1-201ENST00000568600 2415 ntBASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.79■■□□□ 1.24
CPNE9Q8IYJ1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CPNE9Q8IYJ1 ABCB10P4-201ENST00000566803 2184 ntBASIC22.78■■□□□ 1.24
CPNE9Q8IYJ1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.78■■□□□ 1.24
CPNE9Q8IYJ1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 AC120024.1-201ENST00000562672 995 ntBASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPNE9Q8IYJ1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPNE9Q8IYJ1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.75■■□□□ 1.23
CPNE9Q8IYJ1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CPNE9Q8IYJ1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 KRT8P33-201ENST00000508125 1423 ntBASIC22.73■■□□□ 1.23
CPNE9Q8IYJ1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms