Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
LRRC28Q86X40 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC28Q86X40 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LRRC28Q86X40 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC28Q86X40 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC28Q86X40 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC28Q86X40 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC28Q86X40 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC28Q86X40 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC28Q86X40 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC28Q86X40 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC28Q86X40 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC28Q86X40 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC28Q86X40 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC28Q86X40 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC28Q86X40 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC28Q86X40 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC28Q86X40 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC28Q86X40 AC129492.7-201ENST00000622992 756 ntBASIC20.41■□□□□ 0.86
LRRC28Q86X40 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC28Q86X40 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
LRRC28Q86X40 AC004987.1-201ENST00000428627 508 ntBASIC20.4■□□□□ 0.86
LRRC28Q86X40 ATP5G2P3-201ENST00000429083 425 ntBASIC20.4■□□□□ 0.86
LRRC28Q86X40 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC28Q86X40 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRRC28Q86X40 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC28Q86X40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC28Q86X40 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC28Q86X40 TSPY13P-201ENST00000338964 914 ntBASIC20.39■□□□□ 0.85
LRRC28Q86X40 AL033527.3-201ENST00000566366 1196 ntBASIC20.39■□□□□ 0.85
LRRC28Q86X40 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
LRRC28Q86X40 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRC28Q86X40 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC28Q86X40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC28Q86X40 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC28Q86X40 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC28Q86X40 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC28Q86X40 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LRRC28Q86X40 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC28Q86X40 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC28Q86X40 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LRRC28Q86X40 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LRRC28Q86X40 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC28Q86X40 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC28Q86X40 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC28Q86X40 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC28Q86X40 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC28Q86X40 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC28Q86X40 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC28Q86X40 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC28Q86X40 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRRC28Q86X40 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC28Q86X40 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC28Q86X40 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC28Q86X40 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LRRC28Q86X40 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC28Q86X40 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms