Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LYSMD3Q7Z3D4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.2■■□□□ 1.3
LYSMD3Q7Z3D4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 BX664725.1-201ENST00000438252 379 ntBASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LYSMD3Q7Z3D4 LINC01124-201ENST00000409786 2117 ntBASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LYSMD3Q7Z3D4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYSMD3Q7Z3D4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYSMD3Q7Z3D4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LYSMD3Q7Z3D4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LYSMD3Q7Z3D4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 AC239859.2-201ENST00000444165 318 ntBASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LYSMD3Q7Z3D4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 Z92544.1-202ENST00000571933 1220 ntBASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LYSMD3Q7Z3D4 AC021242.3-201ENST00000607598 1377 ntBASIC23.14■■□□□ 1.3
LYSMD3Q7Z3D4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LYSMD3Q7Z3D4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
LYSMD3Q7Z3D4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
LYSMD3Q7Z3D4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 KRT125P-201ENST00000546827 989 ntBASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 AC131274.2-201ENST00000580697 1507 ntBASIC23.13■■□□□ 1.29
LYSMD3Q7Z3D4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LYSMD3Q7Z3D4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.11■■□□□ 1.29
LYSMD3Q7Z3D4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.11■■□□□ 1.29
LYSMD3Q7Z3D4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms