Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CDH17Q12864 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.35■■□□□ 1.33
CDH17Q12864 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH17Q12864 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH17Q12864 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CDH17Q12864 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDH17Q12864 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CDH17Q12864 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH17Q12864 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDH17Q12864 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH17Q12864 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH17Q12864 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH17Q12864 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH17Q12864 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.33■■□□□ 1.33
CDH17Q12864 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.33■■□□□ 1.33
CDH17Q12864 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CDH17Q12864 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.33■■□□□ 1.33
CDH17Q12864 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH17Q12864 AL161729.1-201ENST00000604104 1402 ntBASIC23.33■■□□□ 1.32
CDH17Q12864 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDH17Q12864 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.32■■□□□ 1.32
CDH17Q12864 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH17Q12864 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDH17Q12864 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH17Q12864 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH17Q12864 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH17Q12864 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH17Q12864 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDH17Q12864 AC010980.1-201ENST00000587192 1142 ntBASIC23.31■■□□□ 1.32
CDH17Q12864 PVT1_1.1-201ENST00000615125 194 ntBASIC23.31■■□□□ 1.32
CDH17Q12864 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.31■■□□□ 1.32
CDH17Q12864 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDH17Q12864 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDH17Q12864 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
CDH17Q12864 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CDH17Q12864 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.3■■□□□ 1.32
CDH17Q12864 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDH17Q12864 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH17Q12864 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDH17Q12864 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.29■■□□□ 1.32
CDH17Q12864 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH17Q12864 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH17Q12864 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.29■■□□□ 1.32
CDH17Q12864 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH17Q12864 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH17Q12864 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH17Q12864 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH17Q12864 AL033527.3-201ENST00000566366 1196 ntBASIC23.28■■□□□ 1.32
CDH17Q12864 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.28■■□□□ 1.32
CDH17Q12864 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH17Q12864 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDH17Q12864 AC120024.1-201ENST00000562672 995 ntBASIC23.27■■□□□ 1.32
CDH17Q12864 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDH17Q12864 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH17Q12864 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH17Q12864 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.27■■□□□ 1.32
CDH17Q12864 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CDH17Q12864 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.26■■□□□ 1.31
CDH17Q12864 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.26■■□□□ 1.31
CDH17Q12864 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.26■■□□□ 1.31
CDH17Q12864 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH17Q12864 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CDH17Q12864 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.25■■□□□ 1.31
CDH17Q12864 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH17Q12864 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CDH17Q12864 KRT18P24-201ENST00000344739 1156 ntBASIC23.25■■□□□ 1.31
CDH17Q12864 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.25■■□□□ 1.31
CDH17Q12864 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.25■■□□□ 1.31
CDH17Q12864 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDH17Q12864 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH17Q12864 AL022069.1-201ENST00000568025 1636 ntBASIC23.25■■□□□ 1.31
CDH17Q12864 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.24■■□□□ 1.31
CDH17Q12864 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.24■■□□□ 1.31
CDH17Q12864 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.24■■□□□ 1.31
CDH17Q12864 THA1P-201ENST00000590384 1145 ntBASIC23.24■■□□□ 1.31
CDH17Q12864 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CDH17Q12864 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH17Q12864 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms