Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DEFA3P59666 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
DEFA3P59666 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.3■□□□□ 0.84
DEFA3P59666 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
DEFA3P59666 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.3■□□□□ 0.84
DEFA3P59666 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DEFA3P59666 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA3P59666 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA3P59666 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA3P59666 DUSP8P3-201ENST00000399571 1760 ntBASIC20.29■□□□□ 0.84
DEFA3P59666 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.29■□□□□ 0.84
DEFA3P59666 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.29■□□□□ 0.84
DEFA3P59666 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA3P59666 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA3P59666 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA3P59666 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DEFA3P59666 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DEFA3P59666 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
DEFA3P59666 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
DEFA3P59666 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.28■□□□□ 0.84
DEFA3P59666 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DEFA3P59666 AL121603.2-201ENST00000557373 2117 ntBASIC20.27■□□□□ 0.84
DEFA3P59666 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA3P59666 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA3P59666 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA3P59666 LINC00273-201ENST00000539813 1452 ntBASIC20.27■□□□□ 0.84
DEFA3P59666 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA3P59666 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.27■□□□□ 0.84
DEFA3P59666 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEFA3P59666 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEFA3P59666 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEFA3P59666 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.27■□□□□ 0.83
DEFA3P59666 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
DEFA3P59666 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DEFA3P59666 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
DEFA3P59666 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA3P59666 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.25■□□□□ 0.83
DEFA3P59666 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.25■□□□□ 0.83
DEFA3P59666 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DEFA3P59666 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.25■□□□□ 0.83
DEFA3P59666 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.25■□□□□ 0.83
DEFA3P59666 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
DEFA3P59666 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.25■□□□□ 0.83
DEFA3P59666 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA3P59666 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DEFA3P59666 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.24■□□□□ 0.83
DEFA3P59666 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA3P59666 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
DEFA3P59666 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
DEFA3P59666 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA3P59666 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DEFA3P59666 AL137060.1-201ENST00000618151 2648 ntBASIC20.23■□□□□ 0.83
DEFA3P59666 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA3P59666 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA3P59666 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA3P59666 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
DEFA3P59666 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DEFA3P59666 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.21■□□□□ 0.83
DEFA3P59666 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.21■□□□□ 0.83
DEFA3P59666 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DEFA3P59666 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.21■□□□□ 0.83
DEFA3P59666 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms