Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN20P56880 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 AC068473.5-201ENST00000616428 2072 ntBASIC21.11■□□□□ 0.97
CLDN20P56880 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.11■□□□□ 0.97
CLDN20P56880 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.11■□□□□ 0.97
CLDN20P56880 AC011551.1-201ENST00000614101 683 ntBASIC21.11■□□□□ 0.97
CLDN20P56880 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN20P56880 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN20P56880 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN20P56880 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
CLDN20P56880 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN20P56880 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN20P56880 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN20P56880 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLDN20P56880 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN20P56880 MIR4281-201ENST00000580852 62 ntBASIC21.09■□□□□ 0.97
CLDN20P56880 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN20P56880 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN20P56880 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN20P56880 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN20P56880 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN20P56880 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN20P56880 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN20P56880 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN20P56880 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN20P56880 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CLDN20P56880 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CLDN20P56880 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN20P56880 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CLDN20P56880 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CLDN20P56880 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.08■□□□□ 0.97
CLDN20P56880 AC090877.2-201ENST00000558441 1738 ntBASIC21.08■□□□□ 0.97
CLDN20P56880 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CLDN20P56880 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLDN20P56880 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN20P56880 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN20P56880 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN20P56880 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN20P56880 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN20P56880 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLDN20P56880 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN20P56880 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.06■□□□□ 0.96
CLDN20P56880 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN20P56880 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLDN20P56880 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN20P56880 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN20P56880 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN20P56880 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN20P56880 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLDN20P56880 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.05■□□□□ 0.96
CLDN20P56880 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN20P56880 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.05■□□□□ 0.96
CLDN20P56880 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN20P56880 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 AC239859.2-201ENST00000444165 318 ntBASIC21.04■□□□□ 0.96
CLDN20P56880 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN20P56880 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN20P56880 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN20P56880 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.03■□□□□ 0.96
CLDN20P56880 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.03■□□□□ 0.96
CLDN20P56880 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN20P56880 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN20P56880 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN20P56880 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN20P56880 CLDN5-201ENST00000403084 2357 ntBASIC21.03■□□□□ 0.96
CLDN20P56880 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN20P56880 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLDN20P56880 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN20P56880 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN20P56880 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN20P56880 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLDN20P56880 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLDN20P56880 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms