Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ABCB10P4-201ENST00000566803 2184 ntBASIC21.07■□□□□ 0.96
CDH11P55287 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDH11P55287 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH11P55287 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH11P55287 AC139795.1-202ENST00000500444 432 ntBASIC21.06■□□□□ 0.96
CDH11P55287 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH11P55287 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH11P55287 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH11P55287 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH11P55287 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH11P55287 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH11P55287 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH11P55287 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH11P55287 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH11P55287 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH11P55287 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH11P55287 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH11P55287 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CDH11P55287 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH11P55287 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH11P55287 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CDH11P55287 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH11P55287 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH11P55287 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH11P55287 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH11P55287 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH11P55287 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH11P55287 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH11P55287 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH11P55287 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH11P55287 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH11P55287 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH11P55287 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDH11P55287 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
CDH11P55287 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH11P55287 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21■□□□□ 0.95
CDH11P55287 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH11P55287 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH11P55287 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH11P55287 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH11P55287 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21■□□□□ 0.95
CDH11P55287 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH11P55287 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.99■□□□□ 0.95
CDH11P55287 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH11P55287 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH11P55287 AC010980.1-201ENST00000587192 1142 ntBASIC20.99■□□□□ 0.95
CDH11P55287 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH11P55287 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH11P55287 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH11P55287 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH11P55287 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH11P55287 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDH11P55287 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH11P55287 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH11P55287 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH11P55287 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CDH11P55287 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH11P55287 HLA-L-211ENST00000482052 1765 ntBASIC20.98■□□□□ 0.95
CDH11P55287 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH11P55287 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH11P55287 AC074183.2-201ENST00000623112 922 ntBASIC20.98■□□□□ 0.95
CDH11P55287 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDH11P55287 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH11P55287 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH11P55287 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH11P55287 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH11P55287 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH11P55287 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH11P55287 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDH11P55287 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH11P55287 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.95■□□□□ 0.95
CDH11P55287 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH11P55287 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH11P55287 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH11P55287 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH11P55287 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH11P55287 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH11P55287 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH11P55287 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
CDH11P55287 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH11P55287 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDH11P55287 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH11P55287 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH11P55287 KRT8P33-201ENST00000508125 1423 ntBASIC20.95■□□□□ 0.94
CDH11P55287 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH11P55287 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH11P55287 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms