Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
LBX1P52954 CDCA4P2-201ENST00000441182 718 ntBASIC26.85■■□□□ 1.89
LBX1P52954 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LBX1P52954 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LBX1P52954 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.84■■□□□ 1.89
LBX1P52954 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.84■■□□□ 1.89
LBX1P52954 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
LBX1P52954 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.84■■□□□ 1.89
LBX1P52954 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.84■■□□□ 1.89
LBX1P52954 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
LBX1P52954 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.84■■□□□ 1.89
LBX1P52954 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
LBX1P52954 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.83■■□□□ 1.89
LBX1P52954 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
LBX1P52954 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.83■■□□□ 1.89
LBX1P52954 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LBX1P52954 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LBX1P52954 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.83■■□□□ 1.89
LBX1P52954 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.83■■□□□ 1.89
LBX1P52954 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.83■■□□□ 1.89
LBX1P52954 MIR6084-201ENST00000622012 110 ntBASIC26.83■■□□□ 1.89
LBX1P52954 AL358852.1-201ENST00000623174 1268 ntBASIC26.83■■□□□ 1.89
LBX1P52954 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
LBX1P52954 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LBX1P52954 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.82■■□□□ 1.88
LBX1P52954 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.82■■□□□ 1.88
LBX1P52954 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LBX1P52954 AL109923.1-201ENST00000618799 583 ntBASIC26.82■■□□□ 1.88
LBX1P52954 AC073111.5-205ENST00000641717 521 ntBASIC26.82■■□□□ 1.88
LBX1P52954 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LBX1P52954 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.82■■□□□ 1.88
LBX1P52954 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.82■■□□□ 1.88
LBX1P52954 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LBX1P52954 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
LBX1P52954 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LBX1P52954 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LBX1P52954 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LBX1P52954 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
LBX1P52954 AC126544.1-201ENST00000580842 1059 ntBASIC26.81■■□□□ 1.88
LBX1P52954 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.81■■□□□ 1.88
LBX1P52954 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.81■■□□□ 1.88
LBX1P52954 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
LBX1P52954 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
LBX1P52954 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LBX1P52954 AC093827.2-201ENST00000512654 315 ntBASIC26.8■■□□□ 1.88
LBX1P52954 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.8■■□□□ 1.88
LBX1P52954 KRT18P14-201ENST00000534205 1250 ntBASIC26.8■■□□□ 1.88
LBX1P52954 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.79■■□□□ 1.88
LBX1P52954 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LBX1P52954 TSPY26P-201ENST00000476365 1326 ntBASIC26.79■■□□□ 1.88
LBX1P52954 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LBX1P52954 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.78■■□□□ 1.88
LBX1P52954 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.78■■□□□ 1.88
LBX1P52954 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 BX255925.1-201ENST00000566954 1854 ntBASIC26.77■■□□□ 1.88
LBX1P52954 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
LBX1P52954 AC026185.1-201ENST00000445748 174 ntBASIC26.77■■□□□ 1.88
LBX1P52954 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.77■■□□□ 1.88
LBX1P52954 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LBX1P52954 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.77■■□□□ 1.88
LBX1P52954 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LBX1P52954 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.76■■□□□ 1.87
LBX1P52954 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LBX1P52954 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.76■■□□□ 1.87
LBX1P52954 AL449106.1-201ENST00000608517 1980 ntBASIC26.75■■□□□ 1.87
LBX1P52954 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LBX1P52954 AL499627.2-201ENST00000606283 725 ntBASIC26.75■■□□□ 1.87
LBX1P52954 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
LBX1P52954 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
LBX1P52954 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.74■■□□□ 1.87
LBX1P52954 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LBX1P52954 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LBX1P52954 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.73■■□□□ 1.87
LBX1P52954 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.73■■□□□ 1.87
LBX1P52954 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LBX1P52954 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.73■■□□□ 1.87
LBX1P52954 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.73■■□□□ 1.87
LBX1P52954 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.73■■□□□ 1.87
LBX1P52954 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
LBX1P52954 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LBX1P52954 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LBX1P52954 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.72■■□□□ 1.87
LBX1P52954 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LBX1P52954 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.72■■□□□ 1.87
LBX1P52954 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.72■■□□□ 1.87
LBX1P52954 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.72■■□□□ 1.87
LBX1P52954 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.72■■□□□ 1.87
LBX1P52954 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.72■■□□□ 1.87
LBX1P52954 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
LBX1P52954 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
LBX1P52954 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LBX1P52954 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.71■■□□□ 1.87
LBX1P52954 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
LBX1P52954 AC006015.1-201ENST00000429970 570 ntBASIC26.71■■□□□ 1.87
LBX1P52954 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms