Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC090877.2-201ENST00000558441 1738 ntBASIC21.42■■□□□ 1.02
RNF144AP50876 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF144AP50876 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF144AP50876 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF144AP50876 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF144AP50876 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF144AP50876 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF144AP50876 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF144AP50876 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF144AP50876 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RNF144AP50876 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF144AP50876 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF144AP50876 AC004812.2-201ENST00000611079 2094 ntBASIC21.41■■□□□ 1.02
RNF144AP50876 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF144AP50876 ABCB10P4-201ENST00000566803 2184 ntBASIC21.4■■□□□ 1.02
RNF144AP50876 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF144AP50876 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF144AP50876 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF144AP50876 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF144AP50876 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
RNF144AP50876 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF144AP50876 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF144AP50876 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF144AP50876 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
RNF144AP50876 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF144AP50876 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF144AP50876 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF144AP50876 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RNF144AP50876 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF144AP50876 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF144AP50876 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF144AP50876 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF144AP50876 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF144AP50876 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF144AP50876 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF144AP50876 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF144AP50876 LINC00543-201ENST00000567234 1845 ntBASIC21.38■■□□□ 1.01
RNF144AP50876 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF144AP50876 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF144AP50876 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF144AP50876 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF144AP50876 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF144AP50876 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF144AP50876 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF144AP50876 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF144AP50876 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF144AP50876 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RNF144AP50876 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF144AP50876 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.37■■□□□ 1.01
RNF144AP50876 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF144AP50876 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF144AP50876 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF144AP50876 AC103834.1-201ENST00000520383 144 ntBASIC21.35■■□□□ 1.01
RNF144AP50876 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF144AP50876 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF144AP50876 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF144AP50876 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF144AP50876 AC120024.1-201ENST00000562672 995 ntBASIC21.34■■□□□ 1.01
RNF144AP50876 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF144AP50876 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF144AP50876 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF144AP50876 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RNF144AP50876 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF144AP50876 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF144AP50876 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
RNF144AP50876 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF144AP50876 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF144AP50876 AC019171.1-201ENST00000601251 1056 ntBASIC21.33■■□□□ 1.01
RNF144AP50876 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF144AP50876 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF144AP50876 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.33■■□□□ 1
RNF144AP50876 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.32■■□□□ 1
RNF144AP50876 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF144AP50876 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF144AP50876 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.31■■□□□ 1
RNF144AP50876 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.31■■□□□ 1
RNF144AP50876 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF144AP50876 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.31■■□□□ 1
RNF144AP50876 AC074183.2-201ENST00000623112 922 ntBASIC21.31■■□□□ 1
RNF144AP50876 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.31■■□□□ 1
RNF144AP50876 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF144AP50876 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF144AP50876 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF144AP50876 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF144AP50876 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF144AP50876 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.3■■□□□ 1
RNF144AP50876 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.3■■□□□ 1
RNF144AP50876 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF144AP50876 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF144AP50876 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF144AP50876 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF144AP50876 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms