Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GDNFP39905 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
GDNFP39905 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.01■□□□□ 0.79
GDNFP39905 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.01■□□□□ 0.79
GDNFP39905 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDNFP39905 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.01■□□□□ 0.79
GDNFP39905 EP400NL-214ENST00000641289 2402 ntBASIC20.01■□□□□ 0.79
GDNFP39905 LINC00565-201ENST00000562710 2331 ntBASIC20.01■□□□□ 0.79
GDNFP39905 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20■□□□□ 0.79
GDNFP39905 AC233723.2-201ENST00000623798 2106 ntBASIC20■□□□□ 0.79
GDNFP39905 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDNFP39905 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20■□□□□ 0.79
GDNFP39905 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDNFP39905 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
GDNFP39905 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GDNFP39905 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDNFP39905 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GDNFP39905 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 ECEL1P2-201ENST00000461596 1295 ntBASIC19.99■□□□□ 0.79
GDNFP39905 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDNFP39905 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GDNFP39905 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.99■□□□□ 0.79
GDNFP39905 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
GDNFP39905 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDNFP39905 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GDNFP39905 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.98■□□□□ 0.79
GDNFP39905 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.98■□□□□ 0.79
GDNFP39905 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.98■□□□□ 0.79
GDNFP39905 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.98■□□□□ 0.79
GDNFP39905 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDNFP39905 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDNFP39905 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDNFP39905 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GDNFP39905 SMPD5-203ENST00000639008 1464 ntBASIC19.98■□□□□ 0.79
GDNFP39905 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.98■□□□□ 0.79
GDNFP39905 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GDNFP39905 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDNFP39905 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
GDNFP39905 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDNFP39905 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
GDNFP39905 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDNFP39905 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDNFP39905 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.97■□□□□ 0.79
GDNFP39905 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.97■□□□□ 0.79
GDNFP39905 MIR6089-201ENST00000616698 64 ntBASIC19.97■□□□□ 0.79
GDNFP39905 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDNFP39905 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDNFP39905 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
GDNFP39905 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.97■□□□□ 0.79
GDNFP39905 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDNFP39905 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.96■□□□□ 0.79
GDNFP39905 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
GDNFP39905 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GDNFP39905 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
GDNFP39905 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDNFP39905 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
GDNFP39905 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GDNFP39905 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.95■□□□□ 0.78
GDNFP39905 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDNFP39905 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
GDNFP39905 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.94■□□□□ 0.78
GDNFP39905 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDNFP39905 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GDNFP39905 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GDNFP39905 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.93■□□□□ 0.78
GDNFP39905 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.93■□□□□ 0.78
GDNFP39905 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GDNFP39905 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GDNFP39905 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GDNFP39905 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms