Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPL35AP18077 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPL35AP18077 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPL35AP18077 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPL35AP18077 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPL35AP18077 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.11■□□□□ 0.33
RPL35AP18077 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.11■□□□□ 0.33
RPL35AP18077 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.11■□□□□ 0.33
RPL35AP18077 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RPL35AP18077 KRT16P3-201ENST00000439127 1283 ntBASIC17.11■□□□□ 0.33
RPL35AP18077 AL356441.2-201ENST00000443009 864 ntBASIC17.11■□□□□ 0.33
RPL35AP18077 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.11■□□□□ 0.33
RPL35AP18077 AC131212.1-201ENST00000613771 668 ntBASIC17.11■□□□□ 0.33
RPL35AP18077 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.11■□□□□ 0.33
RPL35AP18077 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPL35AP18077 AC020928.2-201ENST00000588717 2197 ntBASIC17.11■□□□□ 0.33
RPL35AP18077 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
RPL35AP18077 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.1■□□□□ 0.33
RPL35AP18077 UNC93B8-201ENST00000511903 705 ntBASIC17.1■□□□□ 0.33
RPL35AP18077 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.1■□□□□ 0.33
RPL35AP18077 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.1■□□□□ 0.33
RPL35AP18077 MIR6089-201ENST00000616698 64 ntBASIC17.1■□□□□ 0.33
RPL35AP18077 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RPL35AP18077 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.1■□□□□ 0.33
RPL35AP18077 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.1■□□□□ 0.33
RPL35AP18077 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPL35AP18077 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.09■□□□□ 0.33
RPL35AP18077 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 MTDHP2-201ENST00000601468 714 ntBASIC17.09■□□□□ 0.33
RPL35AP18077 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.09■□□□□ 0.33
RPL35AP18077 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.09■□□□□ 0.33
RPL35AP18077 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.09■□□□□ 0.33
RPL35AP18077 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPL35AP18077 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPL35AP18077 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPL35AP18077 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPL35AP18077 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPL35AP18077 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPL35AP18077 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.08■□□□□ 0.32
RPL35AP18077 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPL35AP18077 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPL35AP18077 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPL35AP18077 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPL35AP18077 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.07■□□□□ 0.32
RPL35AP18077 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPL35AP18077 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RPL35AP18077 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RPL35AP18077 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPL35AP18077 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPL35AP18077 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPL35AP18077 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPL35AP18077 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.06■□□□□ 0.32
RPL35AP18077 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPL35AP18077 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.06■□□□□ 0.32
RPL35AP18077 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.06■□□□□ 0.32
RPL35AP18077 AC010997.5-201ENST00000609182 354 ntBASIC17.06■□□□□ 0.32
RPL35AP18077 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.06■□□□□ 0.32
RPL35AP18077 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPL35AP18077 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPL35AP18077 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPL35AP18077 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.05■□□□□ 0.32
RPL35AP18077 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPL35AP18077 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.05■□□□□ 0.32
RPL35AP18077 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RPL35AP18077 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.05■□□□□ 0.32
RPL35AP18077 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.05■□□□□ 0.32
RPL35AP18077 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.05■□□□□ 0.32
RPL35AP18077 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPL35AP18077 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms