Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAB40ALP0C0E4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.82■■□□□ 1.08
RAB40ALP0C0E4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 AC004448.1-201ENST00000458332 883 ntBASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB40ALP0C0E4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 AC145676.1-201ENST00000514988 2004 ntBASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40ALP0C0E4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 AC110285.6-201ENST00000617652 491 ntBASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
RAB40ALP0C0E4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40ALP0C0E4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 AC096631.2-201ENST00000436136 790 ntBASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RAB40ALP0C0E4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 AC133561.4-201ENST00000566112 224 ntBASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
RAB40ALP0C0E4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RAB40ALP0C0E4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB40ALP0C0E4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.75■■□□□ 1.07
RAB40ALP0C0E4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB40ALP0C0E4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 AC020928.2-201ENST00000588717 2197 ntBASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.73■■□□□ 1.07
RAB40ALP0C0E4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB40ALP0C0E4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40ALP0C0E4 AC005703.6-201ENST00000623265 1329 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms