Protein–RNA interactions for Protein: P05386

RPLP1, 60S acidic ribosomal protein P1, humanhuman

Known RBP Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1P05386 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPLP1P05386 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPLP1P05386 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPLP1P05386 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 AC120024.1-201ENST00000562672 995 ntBASIC18.4■□□□□ 0.54
RPLP1P05386 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.4■□□□□ 0.54
RPLP1P05386 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RPLP1P05386 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
RPLP1P05386 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPLP1P05386 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPLP1P05386 FOXO3B-201ENST00000395675 1928 ntBASIC18.39■□□□□ 0.53
RPLP1P05386 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.39■□□□□ 0.53
RPLP1P05386 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPLP1P05386 KRT18P24-201ENST00000344739 1156 ntBASIC18.39■□□□□ 0.53
RPLP1P05386 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.39■□□□□ 0.53
RPLP1P05386 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RPLP1P05386 DUSP8P4-201ENST00000399538 1761 ntBASIC18.39■□□□□ 0.53
RPLP1P05386 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPLP1P05386 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPLP1P05386 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPLP1P05386 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RPLP1P05386 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RPLP1P05386 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RPLP1P05386 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPLP1P05386 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPLP1P05386 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPLP1P05386 AC145676.1-201ENST00000514988 2004 ntBASIC18.37■□□□□ 0.53
RPLP1P05386 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPLP1P05386 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPLP1P05386 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPLP1P05386 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RPLP1P05386 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPLP1P05386 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPLP1P05386 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPLP1P05386 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPLP1P05386 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPLP1P05386 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RPLP1P05386 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.35■□□□□ 0.53
RPLP1P05386 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.35■□□□□ 0.53
RPLP1P05386 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.35■□□□□ 0.53
RPLP1P05386 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.35■□□□□ 0.53
RPLP1P05386 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.35■□□□□ 0.53
RPLP1P05386 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPLP1P05386 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPLP1P05386 AL024507.2-201ENST00000606070 2574 ntBASIC18.35■□□□□ 0.53
RPLP1P05386 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPLP1P05386 AC239859.2-201ENST00000444165 318 ntBASIC18.34■□□□□ 0.53
RPLP1P05386 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPLP1P05386 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RPLP1P05386 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.34■□□□□ 0.53
RPLP1P05386 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPLP1P05386 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPLP1P05386 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPLP1P05386 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPLP1P05386 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPLP1P05386 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPLP1P05386 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPLP1P05386 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.33■□□□□ 0.53
RPLP1P05386 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPLP1P05386 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPLP1P05386 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.33■□□□□ 0.52
RPLP1P05386 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.33■□□□□ 0.52
RPLP1P05386 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RPLP1P05386 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPLP1P05386 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.33■□□□□ 0.52
RPLP1P05386 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPLP1P05386 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
RPLP1P05386 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPLP1P05386 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPLP1P05386 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPLP1P05386 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPLP1P05386 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPLP1P05386 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.32■□□□□ 0.52
RPLP1P05386 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPLP1P05386 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms