Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.9■□□□□ 0.78
DHFRP00374 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DHFRP00374 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DHFRP00374 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.9■□□□□ 0.78
DHFRP00374 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.9■□□□□ 0.78
DHFRP00374 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DHFRP00374 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
DHFRP00374 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DHFRP00374 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DHFRP00374 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.89■□□□□ 0.77
DHFRP00374 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.89■□□□□ 0.77
DHFRP00374 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DHFRP00374 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DHFRP00374 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DHFRP00374 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DHFRP00374 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DHFRP00374 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DHFRP00374 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DHFRP00374 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DHFRP00374 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DHFRP00374 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DHFRP00374 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.87■□□□□ 0.77
DHFRP00374 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DHFRP00374 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DHFRP00374 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DHFRP00374 AC110285.7-201ENST00000624417 1536 ntBASIC19.86■□□□□ 0.77
DHFRP00374 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DHFRP00374 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DHFRP00374 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.85■□□□□ 0.77
DHFRP00374 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DHFRP00374 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.85■□□□□ 0.77
DHFRP00374 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DHFRP00374 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DHFRP00374 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DHFRP00374 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DHFRP00374 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
DHFRP00374 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.84■□□□□ 0.77
DHFRP00374 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.84■□□□□ 0.77
DHFRP00374 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DHFRP00374 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DHFRP00374 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.83■□□□□ 0.77
DHFRP00374 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DHFRP00374 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DHFRP00374 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
DHFRP00374 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DHFRP00374 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DHFRP00374 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.83■□□□□ 0.77
DHFRP00374 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
DHFRP00374 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DHFRP00374 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
DHFRP00374 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
DHFRP00374 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DHFRP00374 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DHFRP00374 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
DHFRP00374 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.83■□□□□ 0.76
DHFRP00374 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.83■□□□□ 0.76
DHFRP00374 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
DHFRP00374 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
DHFRP00374 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.82■□□□□ 0.76
DHFRP00374 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.82■□□□□ 0.76
DHFRP00374 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DHFRP00374 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DHFRP00374 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DHFRP00374 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.82■□□□□ 0.76
DHFRP00374 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DHFRP00374 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DHFRP00374 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
DHFRP00374 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.82■□□□□ 0.76
DHFRP00374 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
DHFRP00374 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DHFRP00374 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.81■□□□□ 0.76
DHFRP00374 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.81■□□□□ 0.76
DHFRP00374 LINC01971-201ENST00000617888 1048 ntBASIC19.81■□□□□ 0.76
DHFRP00374 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
DHFRP00374 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.81■□□□□ 0.76
DHFRP00374 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DHFRP00374 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DHFRP00374 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.81■□□□□ 0.76
DHFRP00374 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DHFRP00374 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DHFRP00374 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DHFRP00374 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.8■□□□□ 0.76
DHFRP00374 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DHFRP00374 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DHFRP00374 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms