Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPHS1O60500 AC079834.2-201ENST00000609776 1949 ntBASIC22.55■■□□□ 1.2
NPHS1O60500 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.55■■□□□ 1.2
NPHS1O60500 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.54■■□□□ 1.2
NPHS1O60500 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.54■■□□□ 1.2
NPHS1O60500 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.54■■□□□ 1.2
NPHS1O60500 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
NPHS1O60500 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.54■■□□□ 1.2
NPHS1O60500 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPHS1O60500 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPHS1O60500 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPHS1O60500 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPHS1O60500 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
NPHS1O60500 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NPHS1O60500 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.53■■□□□ 1.2
NPHS1O60500 AC133552.2-201ENST00000619106 1032 ntBASIC22.53■■□□□ 1.2
NPHS1O60500 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPHS1O60500 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NPHS1O60500 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.53■■□□□ 1.2
NPHS1O60500 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPHS1O60500 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NPHS1O60500 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.52■■□□□ 1.2
NPHS1O60500 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 AC090877.2-201ENST00000558441 1738 ntBASIC22.52■■□□□ 1.2
NPHS1O60500 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NPHS1O60500 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.52■■□□□ 1.2
NPHS1O60500 RPS2P7-201ENST00000447334 885 ntBASIC22.52■■□□□ 1.2
NPHS1O60500 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 MIR4449-201ENST00000578365 66 ntBASIC22.52■■□□□ 1.2
NPHS1O60500 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.52■■□□□ 1.2
NPHS1O60500 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NPHS1O60500 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NPHS1O60500 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
NPHS1O60500 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NPHS1O60500 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.51■■□□□ 1.19
NPHS1O60500 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NPHS1O60500 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.51■■□□□ 1.19
NPHS1O60500 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NPHS1O60500 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NPHS1O60500 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.51■■□□□ 1.19
NPHS1O60500 AL161729.1-201ENST00000604104 1402 ntBASIC22.51■■□□□ 1.19
NPHS1O60500 C9orf163-202ENST00000624034 2573 ntBASIC22.51■■□□□ 1.19
NPHS1O60500 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NPHS1O60500 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NPHS1O60500 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
NPHS1O60500 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NPHS1O60500 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NPHS1O60500 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NPHS1O60500 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.49■■□□□ 1.19
NPHS1O60500 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.49■■□□□ 1.19
NPHS1O60500 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
NPHS1O60500 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NPHS1O60500 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
NPHS1O60500 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NPHS1O60500 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
NPHS1O60500 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
NPHS1O60500 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
NPHS1O60500 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.48■■□□□ 1.19
NPHS1O60500 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NPHS1O60500 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NPHS1O60500 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.48■■□□□ 1.19
NPHS1O60500 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.47■■□□□ 1.19
NPHS1O60500 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
NPHS1O60500 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPHS1O60500 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NPHS1O60500 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
NPHS1O60500 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.47■■□□□ 1.19
NPHS1O60500 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPHS1O60500 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
NPHS1O60500 ANOS2P-203ENST00000472227 1816 ntBASIC22.46■■□□□ 1.19
NPHS1O60500 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.46■■□□□ 1.19
NPHS1O60500 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
NPHS1O60500 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NPHS1O60500 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.46■■□□□ 1.19
NPHS1O60500 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
NPHS1O60500 AL592295.1-201ENST00000400984 884 ntBASIC22.45■■□□□ 1.18
NPHS1O60500 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms