Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AC131274.2-201ENST00000580697 1507 ntBASIC24.58■■□□□ 1.53
TBC1D4O60343 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.58■■□□□ 1.53
TBC1D4O60343 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 AC110285.6-201ENST00000617652 491 ntBASIC24.58■■□□□ 1.53
TBC1D4O60343 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TBC1D4O60343 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
TBC1D4O60343 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
TBC1D4O60343 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.57■■□□□ 1.52
TBC1D4O60343 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TBC1D4O60343 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TBC1D4O60343 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TBC1D4O60343 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.57■■□□□ 1.52
TBC1D4O60343 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TBC1D4O60343 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.56■■□□□ 1.52
TBC1D4O60343 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TBC1D4O60343 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
TBC1D4O60343 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.55■■□□□ 1.52
TBC1D4O60343 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.55■■□□□ 1.52
TBC1D4O60343 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.55■■□□□ 1.52
TBC1D4O60343 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.55■■□□□ 1.52
TBC1D4O60343 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
TBC1D4O60343 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TBC1D4O60343 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.54■■□□□ 1.52
TBC1D4O60343 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.54■■□□□ 1.52
TBC1D4O60343 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.54■■□□□ 1.52
TBC1D4O60343 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TBC1D4O60343 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TBC1D4O60343 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D4O60343 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TBC1D4O60343 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TBC1D4O60343 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.53■■□□□ 1.52
TBC1D4O60343 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TBC1D4O60343 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.53■■□□□ 1.52
TBC1D4O60343 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
TBC1D4O60343 AC096631.2-201ENST00000436136 790 ntBASIC24.52■■□□□ 1.52
TBC1D4O60343 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.52■■□□□ 1.52
TBC1D4O60343 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
TBC1D4O60343 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D4O60343 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.51■■□□□ 1.51
TBC1D4O60343 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.51■■□□□ 1.51
TBC1D4O60343 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.51■■□□□ 1.51
TBC1D4O60343 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D4O60343 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D4O60343 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
TBC1D4O60343 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D4O60343 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D4O60343 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
TBC1D4O60343 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.5■■□□□ 1.51
TBC1D4O60343 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TBC1D4O60343 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.49■■□□□ 1.51
TBC1D4O60343 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
TBC1D4O60343 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TBC1D4O60343 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TBC1D4O60343 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TBC1D4O60343 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TBC1D4O60343 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
TBC1D4O60343 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TBC1D4O60343 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TBC1D4O60343 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D4O60343 AC005703.6-201ENST00000623265 1329 ntBASIC24.47■■□□□ 1.51
TBC1D4O60343 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.47■■□□□ 1.51
TBC1D4O60343 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D4O60343 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TBC1D4O60343 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D4O60343 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
TBC1D4O60343 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
TBC1D4O60343 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D4O60343 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TBC1D4O60343 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D4O60343 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.46■■□□□ 1.51
TBC1D4O60343 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.46■■□□□ 1.51
TBC1D4O60343 AC133561.4-201ENST00000566112 224 ntBASIC24.46■■□□□ 1.51
TBC1D4O60343 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.46■■□□□ 1.51
TBC1D4O60343 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TBC1D4O60343 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D4O60343 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TBC1D4O60343 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TBC1D4O60343 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TBC1D4O60343 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TBC1D4O60343 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.45■■□□□ 1.5
TBC1D4O60343 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TBC1D4O60343 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms