Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
IDH3BO43837 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.02■□□□□ 0.96
IDH3BO43837 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.02■□□□□ 0.96
IDH3BO43837 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
IDH3BO43837 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.02■□□□□ 0.96
IDH3BO43837 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.02■□□□□ 0.96
IDH3BO43837 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IDH3BO43837 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IDH3BO43837 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.02■□□□□ 0.96
IDH3BO43837 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
IDH3BO43837 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.95
IDH3BO43837 AL024507.2-201ENST00000606070 2574 ntBASIC21.01■□□□□ 0.95
IDH3BO43837 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IDH3BO43837 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IDH3BO43837 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.01■□□□□ 0.95
IDH3BO43837 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IDH3BO43837 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21■□□□□ 0.95
IDH3BO43837 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21■□□□□ 0.95
IDH3BO43837 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
IDH3BO43837 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
IDH3BO43837 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IDH3BO43837 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
IDH3BO43837 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
IDH3BO43837 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
IDH3BO43837 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IDH3BO43837 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IDH3BO43837 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.97■□□□□ 0.95
IDH3BO43837 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IDH3BO43837 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.97■□□□□ 0.95
IDH3BO43837 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IDH3BO43837 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.97■□□□□ 0.95
IDH3BO43837 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.97■□□□□ 0.95
IDH3BO43837 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IDH3BO43837 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IDH3BO43837 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.96■□□□□ 0.95
IDH3BO43837 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
IDH3BO43837 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.96■□□□□ 0.95
IDH3BO43837 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IDH3BO43837 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
IDH3BO43837 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
IDH3BO43837 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
IDH3BO43837 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
IDH3BO43837 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
IDH3BO43837 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IDH3BO43837 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IDH3BO43837 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IDH3BO43837 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.95■□□□□ 0.94
IDH3BO43837 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IDH3BO43837 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.95■□□□□ 0.94
IDH3BO43837 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IDH3BO43837 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.94■□□□□ 0.94
IDH3BO43837 AC009831.1-201ENST00000580420 1582 ntBASIC20.94■□□□□ 0.94
IDH3BO43837 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3BO43837 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3BO43837 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
IDH3BO43837 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3BO43837 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.94■□□□□ 0.94
IDH3BO43837 AC133552.2-201ENST00000619106 1032 ntBASIC20.94■□□□□ 0.94
IDH3BO43837 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3BO43837 HLA-L-211ENST00000482052 1765 ntBASIC20.94■□□□□ 0.94
IDH3BO43837 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IDH3BO43837 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
IDH3BO43837 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.93■□□□□ 0.94
IDH3BO43837 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
IDH3BO43837 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IDH3BO43837 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
IDH3BO43837 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.93■□□□□ 0.94
IDH3BO43837 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IDH3BO43837 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
IDH3BO43837 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms