Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.45■□□□□ 0.7
SIRPB1O00241 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIRPB1O00241 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SIRPB1O00241 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.45■□□□□ 0.7
SIRPB1O00241 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
SIRPB1O00241 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIRPB1O00241 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
SIRPB1O00241 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 TSPY13P-201ENST00000338964 914 ntBASIC19.44■□□□□ 0.7
SIRPB1O00241 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.44■□□□□ 0.7
SIRPB1O00241 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SIRPB1O00241 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIRPB1O00241 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SIRPB1O00241 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.43■□□□□ 0.7
SIRPB1O00241 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIRPB1O00241 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
SIRPB1O00241 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIRPB1O00241 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIRPB1O00241 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.42■□□□□ 0.7
SIRPB1O00241 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SIRPB1O00241 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SIRPB1O00241 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SIRPB1O00241 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIRPB1O00241 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIRPB1O00241 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.41■□□□□ 0.7
SIRPB1O00241 AC012354.3-201ENST00000623734 483 ntBASIC19.41■□□□□ 0.7
SIRPB1O00241 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
SIRPB1O00241 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.41■□□□□ 0.7
SIRPB1O00241 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.41■□□□□ 0.7
SIRPB1O00241 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPB1O00241 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 AC010980.1-201ENST00000587192 1142 ntBASIC19.4■□□□□ 0.7
SIRPB1O00241 AC019171.1-201ENST00000601251 1056 ntBASIC19.4■□□□□ 0.7
SIRPB1O00241 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SIRPB1O00241 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.4■□□□□ 0.7
SIRPB1O00241 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.4■□□□□ 0.7
SIRPB1O00241 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.4■□□□□ 0.7
SIRPB1O00241 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPB1O00241 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SIRPB1O00241 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SIRPB1O00241 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SIRPB1O00241 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIRPB1O00241 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPB1O00241 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPB1O00241 AL033527.3-201ENST00000566366 1196 ntBASIC19.39■□□□□ 0.69
SIRPB1O00241 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIRPB1O00241 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPB1O00241 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPB1O00241 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.38■□□□□ 0.69
SIRPB1O00241 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
SIRPB1O00241 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIRPB1O00241 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPB1O00241 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPB1O00241 AC011551.1-201ENST00000614101 683 ntBASIC19.38■□□□□ 0.69
SIRPB1O00241 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.38■□□□□ 0.69
SIRPB1O00241 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.38■□□□□ 0.69
SIRPB1O00241 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SIRPB1O00241 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIRPB1O00241 AC022616.5-201ENST00000518796 181 ntBASIC19.37■□□□□ 0.69
SIRPB1O00241 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.37■□□□□ 0.69
SIRPB1O00241 PVT1_1.1-201ENST00000615125 194 ntBASIC19.37■□□□□ 0.69
SIRPB1O00241 AC074183.2-201ENST00000623112 922 ntBASIC19.37■□□□□ 0.69
SIRPB1O00241 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SIRPB1O00241 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.37■□□□□ 0.69
SIRPB1O00241 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIRPB1O00241 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPB1O00241 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPB1O00241 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SIRPB1O00241 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms