Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDLIM1O00151 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDLIM1O00151 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM1O00151 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM1O00151 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM1O00151 AL359258.2-201ENST00000564063 1566 ntBASIC21.87■■□□□ 1.09
PDLIM1O00151 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM1O00151 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM1O00151 AC092296.2-201ENST00000589470 999 ntBASIC21.87■■□□□ 1.09
PDLIM1O00151 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.87■■□□□ 1.09
PDLIM1O00151 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM1O00151 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM1O00151 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM1O00151 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM1O00151 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
PDLIM1O00151 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM1O00151 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.86■■□□□ 1.09
PDLIM1O00151 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM1O00151 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.86■■□□□ 1.09
PDLIM1O00151 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.86■■□□□ 1.09
PDLIM1O00151 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM1O00151 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.86■■□□□ 1.09
PDLIM1O00151 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM1O00151 RNF126P1-201ENST00000567452 1320 ntBASIC21.85■■□□□ 1.09
PDLIM1O00151 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PDLIM1O00151 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.85■■□□□ 1.09
PDLIM1O00151 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.85■■□□□ 1.09
PDLIM1O00151 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM1O00151 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PDLIM1O00151 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM1O00151 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM1O00151 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.84■■□□□ 1.09
PDLIM1O00151 AL157400.5-201ENST00000507624 621 ntBASIC21.84■■□□□ 1.09
PDLIM1O00151 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM1O00151 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM1O00151 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM1O00151 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PDLIM1O00151 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM1O00151 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDLIM1O00151 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM1O00151 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.82■■□□□ 1.08
PDLIM1O00151 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.82■■□□□ 1.08
PDLIM1O00151 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM1O00151 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM1O00151 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDLIM1O00151 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.82■■□□□ 1.08
PDLIM1O00151 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM1O00151 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM1O00151 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PDLIM1O00151 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM1O00151 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.81■■□□□ 1.08
PDLIM1O00151 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PDLIM1O00151 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM1O00151 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM1O00151 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDLIM1O00151 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 RARRES2P2-201ENST00000394842 485 ntBASIC21.8■■□□□ 1.08
PDLIM1O00151 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.8■■□□□ 1.08
PDLIM1O00151 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.8■■□□□ 1.08
PDLIM1O00151 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM1O00151 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PDLIM1O00151 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.79■■□□□ 1.08
PDLIM1O00151 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.79■■□□□ 1.08
PDLIM1O00151 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 ECEL1P2-201ENST00000461596 1295 ntBASIC21.79■■□□□ 1.08
PDLIM1O00151 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDLIM1O00151 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM1O00151 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PDLIM1O00151 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.78■■□□□ 1.08
PDLIM1O00151 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PDLIM1O00151 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.78■■□□□ 1.08
PDLIM1O00151 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM1O00151 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PDLIM1O00151 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM1O00151 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM1O00151 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM1O00151 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM1O00151 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms