Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AC015802.1-201ENST00000588104 1449 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 RHOQP3-201ENST00000437982 621 ntBASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 PEG13-201ENST00000631594 5667 ntBASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AC018442.1-201ENST00000421439 2061 ntBASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 AC089987.1-201ENST00000551654 2209 ntBASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.6□□□□□ -0.39
RCL1Q9Y2P8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RCL1Q9Y2P8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms