Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 AC138894.2-201ENST00000602838 371 ntBASIC19.19■□□□□ 0.66
SCN11AQ9UI33 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.19■□□□□ 0.66
SCN11AQ9UI33 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 AC027601.3-201ENST00000622907 509 ntBASIC19.19■□□□□ 0.66
SCN11AQ9UI33 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN11AQ9UI33 TBC1D3J-201ENST00000620719 1426 ntBASIC19.18■□□□□ 0.66
SCN11AQ9UI33 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 AC027237.1-201ENST00000560942 655 ntBASIC19.18■□□□□ 0.66
SCN11AQ9UI33 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 AC006453.1-201ENST00000636037 1257 ntBASIC19.18■□□□□ 0.66
SCN11AQ9UI33 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN11AQ9UI33 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 OR2K2-202ENST00000374428 1038 ntBASIC19.17■□□□□ 0.66
SCN11AQ9UI33 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 FGFR3P1-201ENST00000449999 601 ntBASIC19.17■□□□□ 0.66
SCN11AQ9UI33 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AC026803.1-201ENST00000569130 274 ntBASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AC009884.2-201ENST00000603110 324 ntBASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AL022334.2-201ENST00000610000 484 ntBASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN11AQ9UI33 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 ST13P19-201ENST00000442505 1124 ntBASIC19.16■□□□□ 0.66
SCN11AQ9UI33 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN11AQ9UI33 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms