Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC006277.1-201ENST00000624348 1610 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AC006037.2-201ENST00000622975 2232 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AC138749.1-201ENST00000567652 2472 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PRSS44-201ENST00000515154 1146 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 SMCR5-201ENST00000543475 2844 ntBASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC7.67□□□□□ -1.18
CDC42SE1Q9NRR8 LINC00567-201ENST00000569854 3409 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 AC135782.3-201ENST00000562782 2105 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 AC005921.3-201ENST00000623774 2151 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms