Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC055811.4-201ENST00000624039 1754 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 DPM3-202ENST00000368399 517 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC024681.1-201ENST00000521917 487 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC013355.1-201ENST00000562625 723 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 MIR3907-201ENST00000579424 151 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC026740.1-201ENST00000607068 791 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 AL353726.2-201ENST00000623259 884 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 CLUHP2-201ENST00000426660 1303 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 AC092978.1-202ENST00000637590 1327 ntBASIC16.15■□□□□ 0.18
TLR9Q9NR96 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR9Q9NR96 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TLR9Q9NR96 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TLR9Q9NR96 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.18
TLR9Q9NR96 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TLR9Q9NR96 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TLR9Q9NR96 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 AC008132.1-202ENST00000342005 1389 ntBASIC16.14■□□□□ 0.17
TLR9Q9NR96 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 FTLP1-201ENST00000449155 526 ntBASIC16.14■□□□□ 0.17
TLR9Q9NR96 LINC02447-202ENST00000501888 2146 ntBASIC16.14■□□□□ 0.17
TLR9Q9NR96 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR9Q9NR96 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR9Q9NR96 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms