Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 AC013355.1-201ENST00000562625 723 ntBASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 AC132192.2-201ENST00000596206 1147 ntBASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 AL023803.2-201ENST00000620080 638 ntBASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2OQ9C0C9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CYP2T1P-202ENST00000641596 2535 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 DPM3-202ENST00000368399 517 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CEP164P1-201ENST00000455142 418 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AC020922.3-201ENST00000595064 547 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AC148477.9-201ENST00000623974 539 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AL805961.1-201ENST00000642026 753 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 KRT8P29-201ENST00000420409 1371 ntBASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.86■□□□□ 0.29
UBE2OQ9C0C9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 FER1L4-210ENST00000615531 5998 ntBASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 AC114812.1-204ENST00000449669 728 ntBASIC16.85■□□□□ 0.29
UBE2OQ9C0C9 AL353637.1-201ENST00000451571 732 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms