Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 MIR193BHG-211ENST00000641433 5365 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.7□□□□□ -0.54
VGLL1Q99990 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
VGLL1Q99990 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.7□□□□□ -0.54
VGLL1Q99990 MCCD1P2-201ENST00000423228 335 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 FAM8A3P-201ENST00000427218 844 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.7□□□□□ -0.54
VGLL1Q99990 ACTG1P14-201ENST00000446382 1122 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.7□□□□□ -0.54
VGLL1Q99990 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 AC105021.1-202ENST00000570572 669 ntBASIC11.7□□□□□ -0.54
VGLL1Q99990 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
VGLL1Q99990 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.7□□□□□ -0.54
VGLL1Q99990 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VGLL1Q99990 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VGLL1Q99990 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.69□□□□□ -0.54
VGLL1Q99990 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VGLL1Q99990 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
VGLL1Q99990 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
VGLL1Q99990 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.69□□□□□ -0.54
VGLL1Q99990 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.69□□□□□ -0.54
VGLL1Q99990 KRT18P58-201ENST00000527480 1120 ntBASIC11.69□□□□□ -0.54
VGLL1Q99990 BANF1P1-201ENST00000553684 263 ntBASIC11.69□□□□□ -0.54
VGLL1Q99990 AC040169.1-201ENST00000565382 521 ntBASIC11.69□□□□□ -0.54
VGLL1Q99990 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.69□□□□□ -0.54
VGLL1Q99990 AC055717.3-201ENST00000622967 595 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms