Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC069148.1-201ENST00000608741 768 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC092119.3-201ENST00000612618 583 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC114341.1-201ENST00000618070 349 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AF228730.7-201ENST00000641842 219 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 POM121L3P-201ENST00000419331 1163 ntBASIC14.5□□□□□ -0.09
NR1H4Q96RI1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 AC131902.2-201ENST00000566892 2172 ntBASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H4Q96RI1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 CICP16-201ENST00000502609 2813 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 AC012615.1-201ENST00000565797 1299 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 MIR3180-1-201ENST00000580374 94 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms