Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 HLA-J-204ENST00000495278 958 ntBASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.77□□□□□ -0.36
CSMD1Q96PZ7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 AC013726.1-201ENST00000563747 2285 ntBASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 AL118508.1-201ENST00000613502 2345 ntBASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 POU5F1P2-201ENST00000521750 823 ntBASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 REXO1L2P-201ENST00000425429 2069 ntBASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD1Q96PZ7 HIST2H2BA-201ENST00000412169 381 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 IGHEP1-201ENST00000521393 651 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 MIR6125-201ENST00000618986 96 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AP001282.1-201ENST00000531301 1499 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AC093752.3-201ENST00000567343 901 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 AC021016.3-201ENST00000608367 477 ntBASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CSMD1Q96PZ7 LRRC59-203ENST00000576448 1531 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms