Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 RN7SL399P-201ENST00000471648 279 ntBASIC15.59■□□□□ 0.09
RTP4Q96DX8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 RRP7BP-205ENST00000566851 833 ntBASIC15.59■□□□□ 0.09
RTP4Q96DX8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 AL049840.4-201ENST00000602422 811 ntBASIC15.59■□□□□ 0.09
RTP4Q96DX8 AC025048.6-201ENST00000634326 1161 ntBASIC15.59■□□□□ 0.09
RTP4Q96DX8 PRSS30P-206ENST00000641773 873 ntBASIC15.59■□□□□ 0.09
RTP4Q96DX8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.59■□□□□ 0.09
RTP4Q96DX8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTP4Q96DX8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RTP4Q96DX8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RTP4Q96DX8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTP4Q96DX8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.58■□□□□ 0.09
RTP4Q96DX8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AC023310.3-201ENST00000557027 670 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 AC100756.1-201ENST00000562736 682 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 AC138749.3-201ENST00000567691 622 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 BRI3BPP1-201ENST00000594224 787 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 AC116165.1-201ENST00000611806 668 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 BX640514.1-201ENST00000583223 1918 ntBASIC15.58■□□□□ 0.08
RTP4Q96DX8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.58■□□□□ 0.08
RTP4Q96DX8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTP4Q96DX8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.57■□□□□ 0.08
RTP4Q96DX8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.57■□□□□ 0.08
RTP4Q96DX8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTP4Q96DX8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms